IPQ engages with its clients to establish a collaborative approach to its model-building
IPQ typically accomplishes this using a two-phase model, adapted to specific client requirements.
Phase I: In collaboration with “the client”, IPQ will work to help identify and quantify both the critical “unmet clinical (or commercial) needs” and go beyond that to identify and quantify the even more critical “unstated, unmet needs”. We term this “root cause analysis” and work with the client to define, refine and prioritize requirements to address these gaps. IPQ then deconvolutes these “needs” to identify critical concepts and relationships necessary to address them and adds these to its proprietary model of the patient journey, as needed. This is instantiated within IPQ’s novel knowledge graph and identification of critical data sources, public and private, are undertaken.
Client data can be incorporated into this process. Use of IPQ’s knowledge graph identifies additional key concepts and relationships which are reviewed with the client to establish the “disease model” that incorporates the complexity of the real-world patient population, the need for refinement and stratification of existing disease/diagnosis categories and critical factors, e.g. conflicting guidelines, standards of care, reimbursement, that may exist. Phase I is typically done as a pilot study.
Phase II: IPQ will establish a unique federated data model whereby data sources, identified in Phase I, will be linked while maintaining individual data provenance. This enables further linking to national level public data sources in compliance with HIPAA and GDPR requirements. Critical evaluation of specific data fields within each data base, in support of the disease model, will be carried out to establish context and quality/confidence in existing data. This is critical to support quality analysis including AI/ML approaches as data fields with identical labels commonly do not contain data collected or computed in the same manner across multiple data sources. This can be a significant source of uncertainty affecting the analysis results and their potential interpretation because of limited content of contextual data maintained in EHR’s. These qualification factors are maintained in a parallel database so that later analyses can refer to these assessments prior to selection of data cohorts, etc. Missing data, potential biases in data and conflicting data are identified and incorporated into addressing the client’s original and expanded questions. In this manner, both the answers and their specific confidence levels or constraints can be established and reviewed with the client for further action, e.g. further data acquisition, etc.
March 2023
Download PDFMichael Liebman, * Stefania Pieroni, Michela Franchini, Loredana Fortunato, Marco Scalese, Sabrina
Molinaro, Mark Wainger, and Steven P. Reinhardt, Exploratory Research and Hypothesis in
Medicine (1-24) 2022
Application of an Automated Natural Language Processing (NLP) Workflow to Enable Federated Search of External Biomedical Content in Drug Discovery and Development, Robin McEntire, Debbie Szalkowski, James Butler, Michelle S. Kuo, Meiping Chang, Man Chang, Darren Freeman, Sarah McQuay, Jagruti Patel, Michael McGlashen, Wendy D. Cornell, Drug Discovery Today, May, 2016
Allen Glicksman, Misha Rodriguez, Lauren Ring, and Michael Liebman, Innovation in Aging, in press, Shifting the Paradigm, 2021
Mi Franchini, S Pieroni, N Martini, A Ripoli, D Chiappino, F Denoth, M N Liebman, S Molinaro 1 and D Della Latta, International Journal of Environmental Research and Public Health, 17, 8786 (1-19) 2020
Cui, H., Zhang, M., Yang, Q., Li, X., Liebman, M.N., Yu, Y., and Xie L. Biomed Research International 2018
Chorghade, M., Liebman, M., Lushington, G., Naylor, S. and Chaguturu, R.,Drug Discovery World, Winter 2016/2017, p72-90
Integrated Information for integrated Care in the General Practice Setting: Using Social Network Analysis to go
beyond the Diagnosis of Frailty in the Elderly,Franchini, M. Pieroni, S., Fortunato, L, Knezevic, T, Liebman, M.N., Molinaro, S, Clinical Translational Medicine (2016) 5:24
Franchini, M, Pieroni, S, Fortunato, L, Molinaro, S and Liebman, M.N, Current Pharmaceutical Design
(2015) 21(6): 791 – 805
The application of observational data in translational medicine: analyzing tobacco-use behaviors of
adolescents Journal of Translational Medicine 2012, 10:89 doi:10.1186/1479-5876-10-89
Liebman, M., Franchini, M and Molinaro, S, Technology and Health Care 23 (2015) 109–118
Qian, M.. Zhu, B., Wang, X., Liebman, M. N., Seminars in Cell and Developmental Biology, (2016) in press
Hu, H., Correll, M; Kvecher, L.; Osmond, M.; Clark, J.; Bekash, A.; Schwab, G.; Gao, D.; JGao, J.;
Kubatin;, V., Shriver, C.D.; Hooke;, J.A. Maxwell;, L.G. Kovatich, A.J., Sheldon, J.G.; Liebman,
M.N. and Mural, J Biomed Inform. 2011 Dec;44(6):1004-19. Epub 2011 Aug 22.
Huttin, Christine and Michael Liebman, Technology and Healthcare, Vol 19, Number 5 (2011), pp. 349-354
Guo X, Liu R, Shriver CD, Hu H, Liebman MN. Bioinformatics. 2006 Apr 15;22(8):967-73. Epub
2006 Feb 21
Michael N Liebman and Francesco M Marincola. Journal of Translational Medicine 2012,
10:61 doi:10.1186/1479-5876-10-61
Huttin, C.C. and Liebman, M. N. (2013) 21, 183-190
Liebman, M. N., Translational Scientist, (2016) 2701-2705
Michael Liebman, Journal of Translational Medicine 2012, 10(Suppl 2):A43 doi:10.1186/1479-5876-10-S2-A43
Lester, D and Liebman,M. N., Coping with Cancer, Lea K Jacobs, ed, Nova Science, New York, NY 2008
Liebman, M. N. and Molinaro, S, IEEE Transactions on Bioinformatics and Biomedicine (BIBM) Nov. 2011 p645 – 651
Bridging the Gap Between Preclinical and Clinical Informatics via Processes, Communication and Improved Utilization of Data, at CBI’s Hepatotoxicity Summit, Nov 6-7, 2009, Philadelphia, PA
Invited presentation at Knowledge-Based Bioinformatics Workshop, Montreal, Canada, Sept 21-23, 2005
In Silico Technology in Drug Target Identification and Validation, Eds. Dr. Darryl Leon and Dr. Scott Markel
Robert Stevens, Robin McEntire, Carole Goble, Mark Greenwood, Jun Zhao, Anil Wipat and Peter Li, BioSilico, May, 2004
R. McEntire, Peter Karp, Neil Abernethy, David Benton, Gregg Helt, Matt DeJongh, Robert Kent, Anthony Kosky, Suzanna Lewis, Dan Hodnett, Eric Neumann, Frank Olken, Dhiraj Pathak, Peter Tarczy-Hornoch, Luca Toldo and Thodoros Topaloglou, An Evaluation of Ontology Exchange Languages for Bioinformatics, in "Proceedings Eighth International Conference on Intelligent Systems for Molecular Biology", The AAAI Press, Menlo Park, CA, USA, August, 2000
Tim Finin, Don McKay, Rich Fritzson, and Robin McEntire, in "Proceedings of the 13th International Distributed Artificial Intelligence Workshop", AAAI Press, July 1994
Tim Finin, Don McKay, Rich Fritzson, and Robin McEntire, in Toshio Yokoi (Ed.) Building and Sharing of Very Large-Scale Knowledge Bases, Ohmsha and IOS Press, 1994
Email angela@ipqanalytics.com for publications and more information
Approach to COVID-Modeling
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